honeycomb_core/cmap/builder/io/mod.rs
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//! Input/Output features implementation
//!
//! The support for I/O is currently very restricted since this is not the focus of this project.
//! Maps can be built from and serialized to VTK legacy files (both binary and ASCII). The
//! `DATASET` of the VTK file should be `UNSTRUCTURED_GRID`, and only a given set of `CELL_TYPES`
//! are supported, because of orientation and dimension restriction.
// ------ IMPORTS
use crate::prelude::{BuilderError, CMap2, CMapBuilder, DartIdType, Vertex2, VertexIdType};
use crate::{attributes::AttrStorageManager, geometry::CoordsFloat};
use num_traits::Zero;
use std::collections::BTreeMap;
use vtkio::model::{CellType, DataSet, VertexNumbers};
use vtkio::{IOBuffer, Vtk};
// ------ CONTENT
impl<T: CoordsFloat> CMapBuilder<T> {
/// Import and set the VTK file that will be used when building the map.
///
/// # Panics
///
/// This function may panic if the file cannot be loaded.
#[must_use = "unused builder object, consider removing this method call"]
pub fn vtk_file(mut self, file_path: impl AsRef<std::path::Path> + std::fmt::Debug) -> Self {
let vtk_file =
Vtk::import(file_path).unwrap_or_else(|e| panic!("E: failed to load file: {e:?}"));
self.vtk_file = Some(vtk_file);
self
}
}
/// Create a [`CMapBuilder`] from an imported VTK file.
///
/// This implementation is roughly equivalent to the following:
///
/// ```rust,no_run
/// # use honeycomb_core::prelude::CMapBuilder;
/// // `CMapBuilder::from_vtk_file("some/path/to/file.vtk")`, or:
/// let builder = CMapBuilder::<f64>::default().vtk_file("some/path/to/file.vtk");
/// ```
///
/// # Panics
///
/// This function may panic if the file cannot be loaded.
impl<T: CoordsFloat, P: AsRef<std::path::Path> + std::fmt::Debug> From<P> for CMapBuilder<T> {
fn from(value: P) -> Self {
let vtk_file =
Vtk::import(value).unwrap_or_else(|e| panic!("E: failed to load file: {e:?}"));
CMapBuilder {
vtk_file: Some(vtk_file),
..Default::default()
}
}
}
macro_rules! if_predicate_return_err {
($pr: expr, $er: expr) => {
if $pr {
return Err($er);
}
};
}
macro_rules! build_vertices {
($v: ident) => {{
if_predicate_return_err!(
!($v.len() % 3).is_zero(),
BuilderError::BadVtkData("vertex list contains an incomplete tuple")
);
$v.chunks_exact(3)
.map(|slice| {
// WE IGNORE Z values
let &[x, y, _] = slice else { unreachable!() };
Vertex2(T::from(x).unwrap(), T::from(y).unwrap())
})
.collect()
}};
}
#[allow(clippy::too_many_lines)]
/// Internal building routine for [`CMap2::from_vtk_file`].
///
/// # Result / Errors
///
/// This implementation support only a very specific subset of VTK files. This result in many
/// possibilities for failure. This function may return:
///
/// - `Ok(CMap2)` -- The file was successfully parsed and its content made into a 2-map.
/// - `Err(BuilderError)` -- The function failed for one of the following reasons (sorted
/// by [`BuilderError`] variants):
/// - `UnsupportedVtkData`: The file contains unsupported data, i.e.:
/// - file format isn't Legacy,
/// - data set is something other than `UnstructuredGrid`,
/// - coordinate representation type isn't `float` or `double`
/// - mesh contains unsupported cell types (`PolyVertex`, `PolyLine`, `TriangleStrip`,
/// `Pixel` or anything 3D)
/// - `InvalidVtkFile`: The file contains inconsistencies, i.e.:
/// - the number of coordinates cannot be divided by `3`, meaning a tuple is incomplete
/// - the number of `Cells` and `CellTypes` isn't equal
/// - a given cell has an inconsistent number of vertices with its specified cell type
pub fn build_2d_from_vtk<T: CoordsFloat>(
value: Vtk,
mut _manager: AttrStorageManager, // FIXME: find a cleaner solution to populate the manager
) -> Result<CMap2<T>, BuilderError> {
let mut cmap: CMap2<T> = CMap2::new(0);
let mut sew_buffer: BTreeMap<(usize, usize), DartIdType> = BTreeMap::new();
match value.data {
DataSet::ImageData { .. }
| DataSet::StructuredGrid { .. }
| DataSet::RectilinearGrid { .. }
| DataSet::PolyData { .. }
| DataSet::Field { .. } => {
return Err(BuilderError::UnsupportedVtkData("dataset not supported"))
}
DataSet::UnstructuredGrid { pieces, .. } => {
let mut tmp = pieces.iter().map(|piece| {
// assume inline data
let Ok(tmp) = piece.load_piece_data(None) else {
return Err(BuilderError::UnsupportedVtkData("not inlined data piece"));
};
// build vertex list
// since we're expecting coordinates, we'll assume floating type
// we're also converting directly to our vertex type since we're building a 2-map
let vertices: Vec<Vertex2<T>> = match tmp.points {
IOBuffer::F64(v) => build_vertices!(v),
IOBuffer::F32(v) => build_vertices!(v),
_ => {
return Err(BuilderError::UnsupportedVtkData(
"unsupported coordinate type",
))
}
};
let vtkio::model::Cells { cell_verts, types } = tmp.cells;
match cell_verts {
VertexNumbers::Legacy {
num_cells,
vertices: verts,
} => {
// check basic stuff
if_predicate_return_err!(
num_cells as usize != types.len(),
BuilderError::BadVtkData("different # of cell in CELLS and CELL_TYPES")
);
// build a collection of vertex lists corresponding of each cell
let mut cell_components: Vec<Vec<usize>> = Vec::new();
let mut take_next = 0;
for vertex_id in &verts {
if take_next.is_zero() {
// making it usize since it's a counter
take_next = *vertex_id as usize;
cell_components.push(Vec::with_capacity(take_next));
} else {
cell_components
.last_mut()
.expect("E: unreachable")
.push(*vertex_id as usize);
take_next -= 1;
}
}
assert_eq!(num_cells as usize, cell_components.len());
let mut errs =
types
.iter()
.zip(cell_components.iter())
.map(|(cell_type, vids)| match cell_type {
CellType::Vertex => {
if_predicate_return_err!(
vids.len() != 1,
BuilderError::BadVtkData(
"`Vertex` with incorrect # of vertices (!=1)"
)
);
// silent ignore
Ok(())
}
CellType::PolyVertex => Err(BuilderError::UnsupportedVtkData(
"`PolyVertex` cell type",
)),
CellType::Line => {
if_predicate_return_err!(
vids.len() != 2,
BuilderError::BadVtkData(
"`Line` with incorrect # of vertices (!=2)"
)
);
// silent ignore
Ok(())
}
CellType::PolyLine => Err(BuilderError::UnsupportedVtkData(
"`PolyLine` cell type",
)),
CellType::Triangle => {
// check validity
if_predicate_return_err!(
vids.len() != 3,
BuilderError::BadVtkData(
"`Triangle` with incorrect # of vertices (!=3)"
)
);
// build the triangle
let d0 = cmap.add_free_darts(3);
let (d1, d2) = (d0 + 1, d0 + 2);
cmap.force_write_vertex(
d0 as VertexIdType,
vertices[vids[0]],
);
cmap.force_write_vertex(
d1 as VertexIdType,
vertices[vids[1]],
);
cmap.force_write_vertex(
d2 as VertexIdType,
vertices[vids[2]],
);
cmap.force_one_link(d0, d1); // edge d0 links vertices vids[0] & vids[1]
cmap.force_one_link(d1, d2); // edge d1 links vertices vids[1] & vids[2]
cmap.force_one_link(d2, d0); // edge d2 links vertices vids[2] & vids[0]
// record a trace of the built cell for future 2-sew
sew_buffer.insert((vids[0], vids[1]), d0);
sew_buffer.insert((vids[1], vids[2]), d1);
sew_buffer.insert((vids[2], vids[0]), d2);
Ok(())
}
CellType::TriangleStrip => {
Err(BuilderError::UnsupportedVtkData(
"`TriangleStrip` cell type",
))
}
CellType::Polygon => {
let n_vertices = vids.len();
let d0 = cmap.add_free_darts(n_vertices);
(0..n_vertices).for_each(|i| {
let di = d0 + i as DartIdType;
let dip1 =
if i == n_vertices - 1 { d0 } else { di + 1 };
cmap.force_write_vertex(
di as VertexIdType,
vertices[vids[i]],
);
cmap.force_one_link(di, dip1);
sew_buffer
.insert((vids[i], vids[(i + 1) % n_vertices]), di);
});
Ok(())
}
CellType::Pixel => {
Err(BuilderError::UnsupportedVtkData("`Pixel` cell type"))
}
CellType::Quad => {
if_predicate_return_err!(
vids.len() != 4,
BuilderError::BadVtkData(
"`Quad` with incorrect # of vertices (!=4)"
)
);
// build the quad
let d0 = cmap.add_free_darts(4);
let (d1, d2, d3) = (d0 + 1, d0 + 2, d0 + 3);
cmap.force_write_vertex(
d0 as VertexIdType,
vertices[vids[0]],
);
cmap.force_write_vertex(
d1 as VertexIdType,
vertices[vids[1]],
);
cmap.force_write_vertex(
d2 as VertexIdType,
vertices[vids[2]],
);
cmap.force_write_vertex(
d3 as VertexIdType,
vertices[vids[3]],
);
cmap.force_one_link(d0, d1); // edge d0 links vertices vids[0] & vids[1]
cmap.force_one_link(d1, d2); // edge d1 links vertices vids[1] & vids[2]
cmap.force_one_link(d2, d3); // edge d2 links vertices vids[2] & vids[3]
cmap.force_one_link(d3, d0); // edge d3 links vertices vids[3] & vids[0]
// record a trace of the built cell for future 2-sew
sew_buffer.insert((vids[0], vids[1]), d0);
sew_buffer.insert((vids[1], vids[2]), d1);
sew_buffer.insert((vids[2], vids[3]), d2);
sew_buffer.insert((vids[3], vids[0]), d3);
Ok(())
}
_ => Err(BuilderError::UnsupportedVtkData(
"CellType not supported in 2-maps",
)),
});
if let Some(is_err) = errs.find(Result::is_err) {
return Err(is_err.unwrap_err()); // unwrap & wrap because type inference is clunky
}
}
VertexNumbers::XML { .. } => {
return Err(BuilderError::UnsupportedVtkData("XML format"));
}
}
Ok(())
});
// return the first error if there is one
if let Some(is_err) = tmp.find(Result::is_err) {
return Err(is_err.unwrap_err()); // unwrap & wrap because type inference is clunky
}
}
}
while let Some(((id0, id1), dart_id0)) = sew_buffer.pop_first() {
if let Some(dart_id1) = sew_buffer.remove(&(id1, id0)) {
cmap.force_two_sew(dart_id0, dart_id1);
}
}
Ok(cmap)
}
// ------ TESTS
#[cfg(test)]
mod tests;